Application to Namibia17 days ago
Running MOIRE on Namibia data
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MCMC Demonstration17 days ago
Simulation and MCMC | Estimating COI | Estimating effective COI | What is effective COI? | Estimating Relatedness | Estimating allele frequencies | Estimating expected heterozygosity
MCMC Demonstration1 months ago
Simulation and MCMC | Estimating COI | Estimating effective COI | What is effective COI? | Estimating Relatedness | Estimating allele frequencies | Estimating expected heterozygosity
Introduction to SNP-Slice2 months ago
Overview | Installation | Quick start | Understanding results | Downstream analyses | Posterior allele frequencies | Individual COI with uncertainty | Running Your Own Analysis | Parameter Tuning | Convergence diagnostics | Visualizing results | Multiplicity of Infection (MOI) Distribution | Strain Frequency Analysis | Strain Pattern Heatmap | Host-Strain Allocation Heatmap | Summary Statistics | Next steps | References
Application to Namibia2 years ago
Running MOIRE on Namibia data